CDS

Accession Number TCMCG073C24974
gbkey CDS
Protein Id XP_010550474.1
Location join(568639..568650,568758..568871,569162..569267,569613..569727,569812..570021,570119..570401,570630..570753,570863..570969,571057..571128,571239..571286)
Gene LOC104821334
GeneID 104821334
Organism Tarenaya hassleriana

Protein

Length 396aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA268022
db_source XM_010552172.2
Definition PREDICTED: 26S proteasome non-ATPase regulatory subunit 4 homolog isoform X2 [Tarenaya hassleriana]

EGGNOG-MAPPER Annotation

COG_category O
Description Ubiquitin interaction motif
KEGG_TC -
KEGG_Module M00341        [VIEW IN KEGG]
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko00002        [VIEW IN KEGG]
ko03051        [VIEW IN KEGG]
KEGG_ko ko:K03029        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03050        [VIEW IN KEGG]
ko05169        [VIEW IN KEGG]
map03050        [VIEW IN KEGG]
map05169        [VIEW IN KEGG]
GOs GO:0000003        [VIEW IN EMBL-EBI]
GO:0000502        [VIEW IN EMBL-EBI]
GO:0001101        [VIEW IN EMBL-EBI]
GO:0001653        [VIEW IN EMBL-EBI]
GO:0003006        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006508        [VIEW IN EMBL-EBI]
GO:0006511        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006970        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0007154        [VIEW IN EMBL-EBI]
GO:0007165        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0007568        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009408        [VIEW IN EMBL-EBI]
GO:0009555        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009651        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009719        [VIEW IN EMBL-EBI]
GO:0009725        [VIEW IN EMBL-EBI]
GO:0009733        [VIEW IN EMBL-EBI]
GO:0009735        [VIEW IN EMBL-EBI]
GO:0009737        [VIEW IN EMBL-EBI]
GO:0009743        [VIEW IN EMBL-EBI]
GO:0009744        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009888        [VIEW IN EMBL-EBI]
GO:0009908        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010029        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010053        [VIEW IN EMBL-EBI]
GO:0010054        [VIEW IN EMBL-EBI]
GO:0010150        [VIEW IN EMBL-EBI]
GO:0010498        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016049        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019941        [VIEW IN EMBL-EBI]
GO:0021700        [VIEW IN EMBL-EBI]
GO:0022414        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0023052        [VIEW IN EMBL-EBI]
GO:0030154        [VIEW IN EMBL-EBI]
GO:0030163        [VIEW IN EMBL-EBI]
GO:0031593        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033993        [VIEW IN EMBL-EBI]
GO:0034285        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0035966        [VIEW IN EMBL-EBI]
GO:0038023        [VIEW IN EMBL-EBI]
GO:0040007        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0043161        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043248        [VIEW IN EMBL-EBI]
GO:0043632        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044257        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044265        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048229        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048366        [VIEW IN EMBL-EBI]
GO:0048367        [VIEW IN EMBL-EBI]
GO:0048437        [VIEW IN EMBL-EBI]
GO:0048438        [VIEW IN EMBL-EBI]
GO:0048443        [VIEW IN EMBL-EBI]
GO:0048444        [VIEW IN EMBL-EBI]
GO:0048448        [VIEW IN EMBL-EBI]
GO:0048449        [VIEW IN EMBL-EBI]
GO:0048455        [VIEW IN EMBL-EBI]
GO:0048466        [VIEW IN EMBL-EBI]
GO:0048468        [VIEW IN EMBL-EBI]
GO:0048469        [VIEW IN EMBL-EBI]
GO:0048528        [VIEW IN EMBL-EBI]
GO:0048580        [VIEW IN EMBL-EBI]
GO:0048588        [VIEW IN EMBL-EBI]
GO:0048589        [VIEW IN EMBL-EBI]
GO:0048608        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048764        [VIEW IN EMBL-EBI]
GO:0048765        [VIEW IN EMBL-EBI]
GO:0048767        [VIEW IN EMBL-EBI]
GO:0048827        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0048869        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050793        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051239        [VIEW IN EMBL-EBI]
GO:0051603        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051788        [VIEW IN EMBL-EBI]
GO:0060089        [VIEW IN EMBL-EBI]
GO:0060560        [VIEW IN EMBL-EBI]
GO:0061458        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0071695        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080147        [VIEW IN EMBL-EBI]
GO:0090558        [VIEW IN EMBL-EBI]
GO:0090567        [VIEW IN EMBL-EBI]
GO:0090627        [VIEW IN EMBL-EBI]
GO:0090693        [VIEW IN EMBL-EBI]
GO:0090696        [VIEW IN EMBL-EBI]
GO:0090697        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0097305        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:0140030        [VIEW IN EMBL-EBI]
GO:1900140        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901565        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:1901700        [VIEW IN EMBL-EBI]
GO:1902494        [VIEW IN EMBL-EBI]
GO:1905368        [VIEW IN EMBL-EBI]
GO:1905369        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1905393        [VIEW IN EMBL-EBI]
GO:2000026        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGTTCTCGAGGCGACGATGATTTGTATCGATAATTCCGAGTGGATGCGGAATGGGGATTATGCTCCGTCGAGATTCCAGGCTCAAGCCGACGCTGTTAATTTCATTTCTGGAGCTAAAACCCAGTCAAATCCAGAAAATACGGTCGGAATTCTAACGATGGCCGGGAAGGGGGTTCGTGTTTTGGTTACACCAACCAGTGATCTTGGAAAGATCCTAGCGTGCATGCATGGTCTAGAAATAGGTGGGGAGGCGAACCTTGCAGCTGCGATCCAGGTGGCCCAGCTAGCTCTTAAGCACCGGCAAAACAAAAAACAGCAGCAAAGGATTATTGTCTTTGTGGGGAGCCCTGTCAAACACGACAAAAAACAACTAGAGGTGATTGGAAGAAAATTGAAGAAGAATAGTGTTGCCCTTGATATTGTTAACTTTGGTGAAGATGATGAAGGAAAGACGGAAAAGCTTGAGGCACTTCGTGCTGCCGTTGATAATAATGATACTAGCCACATTGTACATATTCCTCCTGGTTCCGATGCTCTCTCGGATGTGCTCATCAGCACGCCAATCTTCACTGGGGATGAGGGCGGGAGTGGTTTTGCAGCTGCTGCTGCTGCAGCAGCAGCTGGAGGTGTATCTGGGTTTGAGTTCGGTGTGGATCCAAACCTTGACCCTGAACTTGCCCTTGCGCTGAGAGTTTCGATGGAGGAGGAGAGAGCTAGGCAAGAAGCAGCTGCTAAGAAGGCCGCCGAGGAGGCTGGTAAGCAGGAACAATCAAGCTCACAGGATGCAACTATGACCGATTCCACTTCTCAAGCTAGCACTAAGAAAACTGATTTAACGGACGAAGAAAACGCTGTGCTGCAACAGGCCCTTCAAATGTCCATGGATGAGCATCCTTCTGGTCACGACGCACAAGACACAGATATGTCTGATGTTGCTATAGATGATCCCGAGTTAGCACTAGCTCTGCAGTTGTCAGTGCAAGATAGTGCAAAAGATTCATCAGGCCAGTCGTCCGATATGGGCAAACTACTGGCAGATCAGTCATTTGTGTCCTCCATCCTTGCATCGCTTCCTGGGGTTGATCCAAACGACCCTTCTGTAAAGGATTTGCTGGCCTCAATGCAAAACCAGCAGTCAGAGAAGCAAGACAAGGGGGAGGAAAAGGGACCAAAGGAGGAGAAAAAATGA
Protein:  
MVLEATMICIDNSEWMRNGDYAPSRFQAQADAVNFISGAKTQSNPENTVGILTMAGKGVRVLVTPTSDLGKILACMHGLEIGGEANLAAAIQVAQLALKHRQNKKQQQRIIVFVGSPVKHDKKQLEVIGRKLKKNSVALDIVNFGEDDEGKTEKLEALRAAVDNNDTSHIVHIPPGSDALSDVLISTPIFTGDEGGSGFAAAAAAAAAGGVSGFEFGVDPNLDPELALALRVSMEEERARQEAAAKKAAEEAGKQEQSSSQDATMTDSTSQASTKKTDLTDEENAVLQQALQMSMDEHPSGHDAQDTDMSDVAIDDPELALALQLSVQDSAKDSSGQSSDMGKLLADQSFVSSILASLPGVDPNDPSVKDLLASMQNQQSEKQDKGEEKGPKEEKK